I saw it yesterday, and sure, there were things that were objectionable, but I saw many things in the movie that were of a religious context. Here are some things with spoilers
I** noticed the belief in heaven: {SPOILER}** The mother of one of the main characters (Linguini) died, and when another character (Skinner) expressed his apologies, Linguini replied that “she believed in heaven, so she’s covered.” This was kind of watered down, but it was a positive reaction**{SPOILER}**
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I noticed the struggle to believe or not to believe: {SPOILER}The rat, Remy struggles whether to believe that the apparition, Gusteau, is real or not real. He always refers to himself as a figment of Remy’s imagination, but in a sarcastic way. For example, Remy would ask: “What can I do?” and the reply would be, “What do I know, I am just a figment of your imagination!” Later, it is revealed that he is not just a figment of his imagination.{SPOILER}
I noticed the intercession of saints:{SPOILER}The deceased (Gusteau) - who is portrayed as a kind, loving, soul - plays an enormous plot in the culmination of real-world events on many levels. Though it is not exactly as we recognize saintly intercession, it recognizes that the saintly deceased still have a role to play in real world events.{SPOILER}
The influence of the Church:{SPOILER}The pivotal do or die scene in which Linguini starts to believe that a rat is helping him, takes place right next to Notre Dame Cathedral.{SPOILER}
The animation is unbelievable, and it almost looks as if some of the computer animation / cinematography was a mixture of live scenery and computer animation. For example, there are scenes that take place in a storm drain. The water and the rat look so real it looks as if they placed a stuffed animal toy in a real flowing river.