Hi, SGWessells,
I read the article. The speculations of some physicists concerning “quantum vacuum fluctuations” and virtual particles omitted an intersting item: the inability to actually measure someting does not negate its existence. These short-lived particles that suddenly appear does not mean they were not there all along and now we able to detect them, or that that God did not create them - like much longer-lived items such as you and I! Truly, this atheistic reference you provided is hardly something that proves anything - simply speculation by those with a real agenda against there being a Creator. Going back to the beginning - something can not come out of nothing - except the speculation contianed in this reference. Ultimately a pattern demonstrates a Pattern Maker… and, that is the name of that tune.
Yet amazingly we know that all the patterns we see around us just happened - and keep on repeating and show what we call ‘random variety’ and then come back to yet another pattern. Try throwing your clock against the wall and see how the pieces go all over the place. Now, gather all of the pieces and throw them agains the wall and see if you get your clock back. The limitations seen with this clock experiement (once per clock!

) are real - and assuming you have an abundance of money - are only limited by how many clocks you want to buy for each throw! Please note, all of these clocks are the result of a real clock maker! A concept that even the Deists had no problem believing as they looked into the visible universe.
One of the more interesting things about ‘truth’ is that our concepts of it keep on changing. For example the “Ptolemaic Universe” was the ‘truth’ from before the Ancient Greeks - but, it repalced the ‘truth’ of a ‘Flat Earth’. The geocentric earth ‘truth’ had a fairly long run on the time scale of ‘earthy truths’ but was eventually replaced by the ‘truth’ of a heliocentric universe as identified by scientists such as Copernicus, Galileo and Kepler. This is not to say that any of these theories are ‘wrong’ - only that as our understandings gained in both depth and precision we were able to see them for what they are and use them (like the ‘shoulders’ that Newton used (now, this is a metaphor, SGWessells… don’t think of Sir Issac climbing up someone’s back) to stand on…
The Truth (upper case “T”) is that God created everything out of nothing - and you are free to accept or reject this Truth while grasping for the ‘truths’ you are clinging to at the moment.
Actually, I do not think anyone can give you such an explanation because of the stipulaton you have given. Psalm 14 has an interesting beginning … in fact, let me return the favor and provide you with a link:
usccb.org/bible/scripture.cfm?bk=Psalms&ch=14 Ultimately, the burden lies with you - until you open not only your mind but your heart - all will remain both hard, sterile and cold. Now, if you dispute this, just wait around and you will have an eternity of empirical evidence.
God bless
First comment: A pattern does not necessarily prove a pattern maker, especially for us humans, who are genetically conditioned to see patterns even when they aren’t there, as in Hamlet’s discussion about clouds with Polonius. Biologically, patterns can accumulate gradually through replicated genes mutating to perform new functions, outmoded structures becoming parts of other structures, and gradual improvements in abilities being refined through natural selection, and so on, each part doing what it is programmed to do. Patterns can occur in nature without being planned by any superintending agency.
Second comment: Clocks are not biological entities; they have no life. We know they are designed by people. It is tempting to expand that fact by analogy to conclude, as Paley did, that everything that has parts which work together to achieve an end must have been designed to achieve that end. But not necessarily. Cumulative evidence from many fields suggests that creatures less skilled at achieving that end (reproduction being the most important for the species) simply died out, skewing the sample by leaving only those whose “pattern” fit for us to judge by.
Third comment: Truth and our concepts of truth overlap, but not completely, and the amount of overlap varies. Ptolemy’s geocentric universe was never “true” no matter how many people thought it was, because that’s not how the cosmos operates, and never was. Reality is not whatever we make it. Truth is not determined by majority vote, even if the majority are certain that “God created everything out of nothing.” Your implication seems to be that scientific “truth” keeps changing, while the “truth” of God remains the same. Maybe, but that could mean only that the Godly never attain any new knowledge

Incidentally, educated ancient Greeks knew the world was round. Apparently the writers of the Bible didn’t go to the right schools.